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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908490.1_cds_XP_016458620.1_52228
CDS Infomation

[gene=LOC107782266] [db_xref=GeneID:107782266] [protein=hypersensitive-induced response protein 2] [protein_id=XP_016458620.1] [location=complement(join(44752..45113,45359..45455,45553..45644,48119..48239,48524..48712))] [gbkey=CDS]
Sequence

ATGGGTCAAGCGCTCGGTTGCATTCAAGTAGATCAGTCAACTGTTGCTGTGAAAGAACAC
TTCGGTAAGTTTGACGAAGTGCTGGAGCCAGGGTGTCACTGTTTGCCTTGGTGTCTTGGG
TATCAGGTCCCTGGTTATCTCTCATTGCGACTACAGCAGCTTGATGTTCGTTGCGAGACA
AAAACAAAGGACAATGTTTTTGTGACTGTTGTAGCATCCATTCAGTACAGAGCGTTAGCA
GAAAATGCAGCTGATGCATTTTACAAGCTCTCTAACACCAAAGGACAGATCCAGTCCTAT
GTTTTTGATGTTATAAGGGCCAGTGTGCCACGATTGGGGTTGGATGCTGCATTTGAGCAG
AAGAACGAAATTGCTAAAGCAGTAGAGGAAGAACTTGAAAAGGCTATGTCTGCTTATGGG
TATGAAATTGTGCAAACCCTCATTGTGGATATAGAGCCAGATCCCCATGTCAAGAGGGCA
ATGAATGAGATTAATGCTGCTGCAAGACTACGTGTTGCTGCGAATGAGAAGGCCGAAGCA
GAGAAAATATTGCAGATCAAGAGAGCTGAAGGAGAAGCTGAATCCAAGTATTTATCAGGG
CTTGGCATTGCTCGACAGCGTCAAGCCATTGTGGATGGTCTTCGAGACAGTGTGCTTGCT
TTCTCAGAGAACGTGCCTGGAACAACAGCGAAAGATGTGATGGACATGGTTCTTGTTACT
CAATATTTTGATACGATGAAGGAGATTGGAGCTACTTCCAAGTCATCTGCTGTGTTTATT
CCCCATGGACCAGGTGCTGTCAAAGACGTTGCTTCTCAAATCCGCGAGGGTCTTCTTCAG
GCTGAAAGTATTCAGCATTAG

Peptide Sequence

PEP ID

XP_016458620.1
PEP Infomation

PREDICTED: hypersensitive-induced response protein 2 [Nicotiana tabacum]
Sequence

MGQALGCIQVDQSTVAVKEHFGKFDEVLEPGCHCLPWCLGYQVPGYLSLRLQQLDVRCET
KTKDNVFVTVVASIQYRALAENAADAFYKLSNTKGQIQSYVFDVIRASVPRLGLDAAFEQ
KNEIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDPHVKRAMNEINAAARLRVAANEKAEA
EKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLAFSENVPGTTAKDVMDMVLVT
QYFDTMKEIGATSKSSAVFIPHGPGAVKDVASQIREGLLQAESIQH

Transcript Sequence

Gene sequence data has not been registered.